This entry was last updated at: Sept. 12, 2016, 6:43 a.m.
Group | [FeFe]-hydrogenases |
Subgroup | [FeFe] Group A2: Glutamate synthase-linked (putative) |
Function | Unconfirmed role. It may couple H2 oxidation to NAD reduction, generating reductant for glutamate synthase. |
Activity | H2-uptake? |
Oxygen tolerance | O2-labile |
Localisation | Cytosolic |
Ecosystem distribution | Gastrointestinal tracts, anoxic soils and sediments |
Taxonomic distribution | Encoded in anaerobic bacteria, including Firmicutes, Actinobacteria, and Proteobacteria |
e.g. Desulfovibrio vulgaris (WP_010939059.1):
Structures |
|
Subunits | 2 |
Subunit description | HydA (catalytic subunit) GltA (NADH-dependent glutamate synthase) |
Catalytic site | [FeFe]-centre |
FeS clusters | 3 [4Fe4S] clusters, 1 [2Fe2S] cluster |
NCBI Accession | Organism | Hydrogenase Class | Phylum | Order | Activity (Predicted) | Oxygen Tolerance (Predicted) | Subunits (Predicted) | Metal Centres (Predicted) | Accessory Subunits (Predicted) |
---|---|---|---|---|---|---|---|---|---|
WP_022369673.1 | Eggerthella sp. CAG:368 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022363186.1 | Eggerthella sp. CAG:298 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_021900643.1 | Eggerthella sp. CAG:1427 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_028088444.1 | Dorea longicatena | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_005338995.1 | Dorea formicigenerans | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_010939059.1 | Desulfovibrio vulgaris | [FeFe] Group A2 | Deltaproteobacteria | Desulfovibrionales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_027174791.1 | Desulfovibrio aminophilus | [FeFe] Group A2 | Deltaproteobacteria | Desulfovibrionales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_015904515.1 | Desulfobacterium autotrophicum | [FeFe] Group A2 | Deltaproteobacteria | Desulfobacterales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022378933.1 | Cryptobacterium sp. CAG:338 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_013708694.1 | Coriobacterium glomerans | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022349260.1 | Collinsella sp. CAG:398 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022387742.1 | Collinsella sp. CAG:289 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022094311.1 | Collinsella sp. CAG:166 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_006235348.1 | Collinsella aerofaciens | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_005583237.1 | Clostridium ultunense | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_015393386.1 | Clostridium saccharoperbutylacetonicum | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_016147589.1 | Butyricicoccus pullicaecorum | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022362192.1 | Bacteroides pectinophilus | [FeFe] Group A2 | Bacteroidetes | Bacteroidales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_021625383.1 | Atopobium sp. 810 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_028264340.1 | Atopobium fossor | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_009203940.1 | Anaerostipes hadrus | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_006565663.1 | Anaerostipes caccae | [FeFe] Group A2 | Firmicutes | Clostridiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022741745.1 | Adlercreutzia equolifaciens | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_012939287.1 | Acidaminococcus fermentans | [FeFe] Group A2 | Firmicutes | Selenomonadales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
Genetics: