This entry was last updated at: Sept. 12, 2016, 6:43 a.m.
Group | [FeFe]-hydrogenases |
Subgroup | [FeFe] Group A2: Glutamate synthase-linked (putative) |
Function | Unconfirmed role. It may couple H2 oxidation to NAD reduction, generating reductant for glutamate synthase. |
Activity | H2-uptake? |
Oxygen tolerance | O2-labile |
Localisation | Cytosolic |
Ecosystem distribution | Gastrointestinal tracts, anoxic soils and sediments |
Taxonomic distribution | Encoded in anaerobic bacteria, including Firmicutes, Actinobacteria, and Proteobacteria |
e.g. Desulfovibrio vulgaris (WP_010939059.1):
Structures |
|
Subunits | 2 |
Subunit description | HydA (catalytic subunit) GltA (NADH-dependent glutamate synthase) |
Catalytic site | [FeFe]-centre |
FeS clusters | 3 [4Fe4S] clusters, 1 [2Fe2S] cluster |
NCBI Accession | Organism | Hydrogenase Class | Phylum | Order | Activity (Predicted) | Oxygen Tolerance (Predicted) | Subunits (Predicted) | Metal Centres (Predicted) | Accessory Subunits (Predicted) |
---|---|---|---|---|---|---|---|---|---|
WP_022378933.1 | Cryptobacterium sp. CAG:338 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022387742.1 | Collinsella sp. CAG:289 | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_022741745.1 | Adlercreutzia equolifaciens | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_028027642.1 | Enterorhabdus mucosicola | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_028264340.1 | Atopobium fossor | [FeFe] Group A2 | Actinobacteria | Coriobacteriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_015904515.1 | Desulfobacterium autotrophicum | [FeFe] Group A2 | Deltaproteobacteria | Desulfobacterales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_010939059.1 | Desulfovibrio vulgaris | [FeFe] Group A2 | Deltaproteobacteria | Desulfovibrionales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_027174791.1 | Desulfovibrio aminophilus | [FeFe] Group A2 | Deltaproteobacteria | Desulfovibrionales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_011342272.1 | Pelobacter carbinolicus | [FeFe] Group A2 | Deltaproteobacteria | Desulfuromonadales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_033162999.1 | Sharpea azabuensis | [FeFe] Group A2 | Firmicutes | Lactobacillales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_027824154.1 | Laribacter hongkongensis | [FeFe] Group A2 | Betaproteobacteria | Neisseriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_028533896.1 | Paludibacterium yongneupense | [FeFe] Group A2 | Betaproteobacteria | Neisseriales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_013499973.1 | Rhodopseudomonas palustris | [FeFe] Group A2 | Alphaproteobacteria | Rhizobiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_026783301.1 | Pleomorphomonas koreensis | [FeFe] Group A2 | Alphaproteobacteria | Rhizobiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_026790595.1 | Pleomorphomonas oryzae | [FeFe] Group A2 | Alphaproteobacteria | Rhizobiales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_008382437.1 | Rhodovulum sp. PH10 | [FeFe] Group A2 | Alphaproteobacteria | Rhodobacterales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_018606045.1 | Uliginosibacterium gangwonense | [FeFe] Group A2 | Betaproteobacteria | Rhodocyclales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_002727095.1 | Phaeospirillum molischianum | [FeFe] Group A2 | Alphaproteobacteria | Rhodospirillales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_021130842.1 | Phaeospirillum fulvum | [FeFe] Group A2 | Alphaproteobacteria | Rhodospirillales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_009146318.1 | Phascolarctobacterium succinatutens | [FeFe] Group A2 | Firmicutes | Selenomonadales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_012939287.1 | Acidaminococcus fermentans | [FeFe] Group A2 | Firmicutes | Selenomonadales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_010690649.1 | Treponema denticola | [FeFe] Group A2 | Spirochaetes | Spirochaetales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_013738980.1 | Sphaerochaeta coccoides | [FeFe] Group A2 | Spirochaetes | Spirochaetales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
WP_009165839.1 | Pyramidobacter piscolens | [FeFe] Group A2 | Synergistetes | Synergistales | Evolving | Labile | 2 | [FeFe]-centre, 3 x [4Fe4S] clusters, 1 x [2Fe2S] cluster | NADH-dependent glutamate synthase |
Genetics: